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Mobilogram ms_plotly#
This example makes a simple plot This example shows how to use different approaches.
import pandas as pd
import requests
from io import StringIO
pd.options.plotting.backend = "ms_plotly"
# download the file for example plotting
url = "https://github.com/OpenMS/pyopenms_viz/releases/download/v0.1.5/ionMobilityTestFeatureDf.tsv"
response = requests.get(url)
response.raise_for_status() # Check for any HTTP errors
df = pd.read_csv(StringIO(response.text), sep="\t")
df.plot(
kind="mobilogram",
x="im",
y="int",
by="Annotation",
aggregate_duplicates=True,
legend=dict(bbox_to_anchor=(1, 0.7)),
)
Total running time of the script: (0 minutes 0.221 seconds)